Vertical slice

Zatka-Haas Visual Decision

Analysis-backed slice for the Zatka-Haas et al. mouse visual decision Figshare release. It uses the public code ZIP plus targeted extraction of the higher-power optogenetic inactivation MATLAB table from the split archive, harmonizing 10,054 processed behavioral trials before neural joins.

No in-browser analysis cell is bundled for this slice yet. Run the pipeline locally with uv run behavtaskatlas zatka-haas-visual-decision-report to generate full artifacts.

Findings extracted

Curves attached to this slice, on shared signed-evidence axes.

Metrics

Trials 10,054
Response trials 7,547
Summary rows 13

Slice profile

Operational variables for cross-slice comparison.

Species
mouse
Modality
visual
Stimulus metric
bilateral contrast tuple and signed contrast difference
Evidence type
static
Choice type
free-response
Response modality
wheel
Source data level
processed-trial
Analysis outputs
real-trial report, choice surface, withhold rate, laser-state and laser-region summaries, matched perturbation deltas, region-effect summaries, source code manifest
Data scope
targeted higher-power inactivation behavioral table plus public code ZIP
Canonical axis
right contrast minus left contrast, with blank trials as zero

Reproduce locally

Copy this recipe to rebuild the slice's artifacts on your machine at the exact commit deployed here.

Reproduce locally

Run the slice pipeline at this commit

git clone https://github.com/aeronjl/behavtaskatlas.git
cd behavtaskatlas
git checkout ec14ee5
uv sync
uv run behavtaskatlas zatka-haas-visual-decision-download
uv run behavtaskatlas zatka-haas-visual-decision-harmonize
uv run behavtaskatlas zatka-haas-visual-decision-analyze
uv run behavtaskatlas zatka-haas-visual-decision-report

No --extra group inferred — see the repository README for the right extras flag if the slice has analysis-only deps. Recipe pinned to commit ec14ee5 so a teammate runs the same code path the deploy used.

Artifacts

Slice has a generated local report; the analysis pipeline ran cleanly and produced trial-level output, plots, and provenance.