uv run behavtaskatlas ibl-brainwide-map-behavior-report
to generate full artifacts.
Vertical slice
IBL Brainwide Map Behavior
Adapter-backed behavior slice for one IBL Brainwide Map Neuropixels session. The harmonizer uses the existing IBL trials-table adapter while stamping the canonical rows with the Brainwide Map dataset id and provenance for the `Brainwidemap` release tag, AWS registry entry, ONE project, and selected trials-table revision.
Findings extracted
Curves attached to this slice, on shared signed-evidence axes.
Metrics
Trials 569
Response trials 537
No-response trials 32
Prior blocks 3
Slice profile
Operational variables for cross-slice comparison.
- Species
- mouse
- Modality
- visual
- Stimulus metric
- signed contrast and block prior probability
- Evidence type
- mixed
- Choice type
- 2afc
- Response modality
- wheel
- Source data level
- processed-trial
- Analysis outputs
- behavioral psychometric curve by prior block
- Data scope
- one IBL Brainwide Map Neuropixels session
- Canonical axis
- signed contrast percent, right positive
Reproduce locally
Copy this recipe to rebuild the slice's artifacts on your machine at the exact commit deployed here.
Reproduce locally
Run the slice pipeline at this commit
git clone https://github.com/aeronjl/behavtaskatlas.git cd behavtaskatlas git checkout ec14ee5 uv sync --extra ibl uv run behavtaskatlas ibl-brainwide-map-behavior-download uv run behavtaskatlas ibl-brainwide-map-behavior-harmonize uv run behavtaskatlas ibl-brainwide-map-behavior-analyze uv run behavtaskatlas ibl-brainwide-map-behavior-report
Extras group ibl pulls in the analysis dependencies for this family. Recipe pinned to commit ec14ee5 so a teammate runs the same code path the deploy used.
Artifacts
- Report HTML ibl_brainwide_map/ebce500b-c530-47de-8cb1-963c552703ea/report.html
- Analysis result JSON ibl_brainwide_map/ebce500b-c530-47de-8cb1-963c552703ea/analysis_result.json
- Psychometric SVG ibl_brainwide_map/ebce500b-c530-47de-8cb1-963c552703ea/psychometric.svg
- Psychometric summary CSV ibl_brainwide_map/ebce500b-c530-47de-8cb1-963c552703ea/psychometric_summary.csv
- Canonical trials CSV ibl_brainwide_map/ebce500b-c530-47de-8cb1-963c552703ea/trials.csv
- Slice notes ../vertical_slices/ibl_brainwide_map/README.md
- Source field mapping ../vertical_slices/ibl_brainwide_map/source_fields.yaml
- Analysis record ../analyses/ibl_brainwide_map.yaml